vampire.datasets.wdr7_hprc#
- vampire.datasets.wdr7_hprc()[source]#
Load 69 bp VNTR locus in the intron of the gene WDR7 among the 94 HPRC samples and T2T-CHM13v2.0. The coordinates on T2T-CHM13v2.0 are chr18:57,226,379-57,227,527.
This dataset contains annotations of a 69-bp motif VNTR locus (chr18:57,226,379-57,227,527 in T2T-CHM13v2.0) located within an intron of the `WDR7` gene across 95 human haplotype assemblies, including 47 individuals from Phase 1 of the Human Pangenome Reference Consortium (HPRC) and the T2T-CHM13v2.0 reference genome.
- Returns:
Raw AnnData object without any processing.
- Return type:
AnnData